Though Hibiki and crew defeated a super-huge battleship of the earth in the last of the first stage, they noticed five battleships further aiming at Mejeiru and Tarahk. And, crew of NIRVANA learnt Tarahk and Mejeiru which were their home had been faced to the crisis of Karitori (reaping). Travel to their home is speed up so that they may inform of the crisis. On the way, current information of the earth having been brought by girl Misty who had come to travel with them was worse than they can imagine. Hibiki and crew noticed a true fight was in the future. VANDREAD is finally changed into final system by the attack of the enemy who becomes violent more and more. Can they save their home? And, what happens to the relations between Hibiki and Dita?

A year has passed since the Star Force returned to save the Earth but another danger now approaches from deep space. A gigantic White Comet hurtles toward our galaxy, obliterating everything in its path. But it is no ordinary comet—it is the deadly Comet Empire, conqueror of worlds... and Earth is the next target! Against orders, the Star Force blasts off to investigate, but even if they can get past the flagship Andromeda, they don't yet know the true nature of their new enemy! (Source: AniDB)

In a dark corner of the universe, intergalactic criminal Kain breaks out of prison and destroys the Galaxy Police Headquarters. Basking in the afterglow of the terror and destruction he has caused, Kain sets his sights toward a much bigger prize waiting on Earth. Meanwhile, Tenchi Masaki and his crew are watching some old home videos of his mother, Achika. As the film rolls, Achika slowly starts to vanish. While watching her fade away, Tenchi also begins to disappear. However, thanks to a device created by Washuu Hakubi, Tenchi is not gone for good. The gang soon learns about Kain and deduce that he must have done something to Achika, which has resulted in time being altered. To save himself and maintain the future, Tenchi travels with the girls back in time to protect his mother from her fate.

The Great Kanto Desert, a sweltering wasteland of nothing but ruins and sand, is all that remains of post-apocalyptic Japan. The once fair population has been left to cling to the inhospitable dunes for survival. At least, that is the case for normal people. For those who have spent a little too long in the Kanto sun, the desert offers a wondrous opportunity to make a name for themselves. One such person is the masked handyman "Sunabouzu," or Desert Punk, who has forged a legendary reputation for always finishing his jobs, no matter the nature or cost. Cunning and ruthless, he has become a force of crude destruction to the other desert people. However, the "Vixen of the Desert," Junko Asagiri, discovers that Sunabouzu is not without his weaknesses—he is easily swayed by his insatiable lust for large-breasted desert babes. Following their chaotic adventures through the Kanto Desert, Sunabouzu features a bizarre cast of personalities who entertain themselves with senseless violence and perversion in a world long destroyed by their forefathers. And just like them, they have not learned a damn thing. [Written by MAL Rewrite]